PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN03837.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 278aa    MW: 30067 Da    PI: 6.2562
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN03837.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.46.9e-10128172554
                 HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH   5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                 h+++Er RR+ri +++  L+el+P+ +      K + a++L + v+Y+k L
  KHN03837.1 128 HSIAERLRRERIAERIRALQELVPSvN------KTDRAAMLDEIVDYVKFL 172
                 99***********************55......****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474593.01E-15121182IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088816.12123172IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.107.1E-15125182IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.5E-7128172IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003539.5E-11129178IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009567Biological Processdouble fertilization forming a zygote and endosperm
GO:0031347Biological Processregulation of defense response
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    Send to blast
MANHPSEAPT DDFLEQILGL STFASADPAA DASPMMLQLN SGDAATHLAA FHAPPYQLGL  60
SLDQGKGPFL TPEDASGSGK RFRDDVVDTR PKNFFHGQPM PTTVPTAPHP PAVRPRVRAR  120
RGQATDPHSI AERLRRERIA ERIRALQELV PSVNKTDRAA MLDEIVDYVK FLRLQVKVLS  180
MSRLGGAGAV APLVTDIPLS SVEEEGGEGR NQPAWEKWSN DGTERQVAKL MEENVGAAMQ  240
FLQSKALCIM PVSLASAIYQ SQPSGTSSIV KPETNPPS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1132137RLRRER
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003536810.11e-174PREDICTED: transcription factor UNE12
SwissprotO227681e-129UNE12_ARATH; Transcription factor UNE12
TrEMBLA0A0B2P8A10.0A0A0B2P8A1_GLYSO; Transcription factor UNE12
STRINGGLYMA10G03690.11e-173(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF54493253
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02590.21e-105bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]